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Imaris 4.0.5 Release Notes

Welcome to the Imaris 4.0.5 release notes. In this version we have changed the configuration of Imaris and introduced a lot of key features. Version Date: FEB 13, 2004.

[Imaris]
[Imaris Time / Imaris Measurement Pro]
[Imaris FilamentTracer]
[Imaris Coloc]
[Fixed Bugs]
[Feedback]

Imaris
Topography
  • The Module is now available as common Imaris module.
Image Processing
  • Delete Slice
  • Channel Shift
  • Edge preserving Filter (anisotropic diffusion filter)
  • Background Subtraction
  • Connective Baseline
  • Performance of Gaussian filter improved. The duration is no longer dependant on the filter size!
File I/O
  • CellR reader
  • CellR writer
  • OME Xml reader
  • OME Xml writer
  • Nikon ICS reader
  • Imaris 4D single file reader
  • Imaris 4D single file writer
  • Save Slice animation as AVI or Mpeg
Surpass
  • Clipping Plane selectively clips objects.
  • Extended Section in Ortho Slicer (+ and – on numeric keypad increases or decreases depth of field)
  • Fast axis change on OrthoSlicer with right mouse button click in selection mode.
  • Double Threshold Iso Surface
  • Mask Channel from Surface Object and Iso Surface allowing users to work on arbitrary regions of interest.
Miscellaneous
  • Flexlm Version 9.2
  • License server all licenses checked out message
  • Resizable channel visibility window


Imaris Time / Imaris Measurement Pro
File I/O
  • Imaris 4D single file reader
  • Imaris 4D single file writer
Tracking with Imaris Track spots with 3 different algorithms: Brownian motion, autoregressive motion, or new Diatrack algorithm from Semasopht.


Imaris FilamentTracer
FilamentTracer is a new module and has been released with Imaris 4.0.4. For the current release the graphics performance and quality has been improoved. Multiple Filament objects can now be merged into a single filament object.


Imaris Coloc
Miscellaneous
  • different snapshots for image and histogram


Fixed Bugs (since Imaris 4.0.4)
347Fluoview Reader Error 347
463Save Imaris 3 datasets with a running number in the middle fails 
531ICS import from AD 9.1.2 fails 
538Tree List must be inactivated while loading scene 
566multiple imaris 4d files are interpreded as series 
571Show Object Shape slow 
575export -> load spot tracking scene causes unrecoverable error 
576Track scene looses time colormap property 
567Mask Channel results shows spikes 
372Position of light not correct restored with scene 
483Patchy AVI export 
519Imaris freezes when saved scene is loaded 
525contour disappears during image processing 
534Cancel track statistics calculation crashes Imaris 
535Shadow in Full3D shows ugly stripes 
542scene file restores wrong light position 
548FilamentTracer: Cancel graph compilation crashes Imaris 
560Crash when Track Group is selected 
577filamenttracer crash if progress is canceled 
580Refrence to wrong 4D dataset 
581Import of 4D Tiff series from Imaris fails 
582Repeated save as Tiff series does show all images which will be over written
584Delete Spots Object crashes Imaris 
587Zeiss AxioVision channel are splitted 
590Measurement Point on Orthoslicer 
5912D spot detection puts two spots in the same place 
592In Excel numbers with 1.## have wrong format. 
594fileopen crashes imaris if contour statistics viewer open 
343Olympus Fluoview parameters missing 
527Crash when opening lsm or STK files with Auto Format detection 
528ISO Resampling parameters 
533Crash if no valid license when FLEXLM_DIAGNOSTICS is set in the registry 
579Full3D blend animation shows black edges 
588read 2D overt time IM classic progressbar flickers 
589Slice distance measurement does not work on 2D image 
5932D time reload fails 
595Wrong channel number in channel description 
596Interpolate allways on in Easy3D 
598Volume not updated when Threhold changed by typing 
599No column headers in Excel export 
600Drift correction changes voxel size 


Feedback

Any feedback on the installation, and the usage of the Beta products listed above are more than welcome! Please send your comments directly to the product management ( messerli@bitplane.com )



Last Modification: CL,  13-FEB-2004

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